CDS

Accession Number TCMCG017C04291
gbkey CDS
Protein Id OMP09123.1
Location complement(join(4544..4732,4832..4945,5034..5217,5832..5949,6152..6280,6400..6451,6602..6752,7093..7193))
GeneID InterPro:IPR007023
Organism Corchorus olitorius
locus_tag COLO4_05789

Protein

Length 345aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012457.1
Definition Ribosomal biogenesis regulatory protein [Corchorus olitorius]
Locus_tag COLO4_05789

EGGNOG-MAPPER Annotation

COG_category J
Description Involved in ribosomal large subunit assembly
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14852        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000054        [VIEW IN EMBL-EBI]
GO:0000055        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006862        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015711        [VIEW IN EMBL-EBI]
GO:0015748        [VIEW IN EMBL-EBI]
GO:0015780        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015865        [VIEW IN EMBL-EBI]
GO:0015866        [VIEW IN EMBL-EBI]
GO:0015868        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051503        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090480        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:1901264        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGATGGAGATGGAGAACCAGAAGCCCATTCAAGTAGACCTGGGACATCTCTTGGCTTTCAACCCTTTTCACAACTTCCCTTCCCTTCCCACTTCCAGGGATGAACTGGTTAAGGAATGTTTAGAGGAAGGTACCAAGCTAGTTCAAGCGGTTGCAGATAGTCTTTTTAACTTACCTTCAACTGAAGATGTAGATGGGCCTCTTGTTAAGTTGCCTCCCCCAACAACAAAACTTCCAAGGGAGAAGCATCTTCCGAAGCCTAAACCTCCAACAAAATGGGAGGAGTTTGCTAAAAAGAAAGGTATCAAGAAGCGTAAAAAGGACAAGGTTGTGTGGGATGAACAAACTGGCACATGGAAACGTCGCTTTGGTTATGATCGCGTAAATGATGATAAAGACGTACCCATCATTGACGCCAAGATGACTGACGAGCCAGGAGAGGATCCGTATGCTAAAAGAAAAGATGATAAGAAGAAACGGGTTGAGAAGCAGGAGAAGAACCGCCTGCAGAACTTGAAACAAGCTGCAAAAGTTGGTGCTTTGCCAAGCCATGTTCAGCTTGCTGCTACAGCTCTGCCCATAACAGGAACACAGGCTCCACAAAAGAAAGTTACTAAAGATGAATTGGGGAATGTAGCCGGGATGGCTGCGACTTCCACAGCCAGTGGTGGGAAATTTGATAGGAAGTTGCCGGGAGAAAAGCCTGCTAAAAAGCAAGGAAAGCACCGCAAGTTCCTACCTGTCGTTGAGGGATCAGGGATTGGCTCGCGAGAGAAGGAGCAAAATGATAATGTTCTAAATAAGTTGATCTCTAAGCATTCCCATGAGATACTCAATGTTGGCAAGGCTGTTACCATGTATAATGTGAAGAAAGAGAAGAAATACAGGAATAAAAAGAATCAAGAAGGGAAGTCCTCATCATCATCCTCAAGCAAGTTGAAACCAAAAAAGCAAATTAATAAGAAGTCTGCAAAGAAAGGATCCGGGTCTGCAAAGAAAGGATCCGGGTCCGCAAAGAAAGGGAAGGCGAAATGA
Protein:  
MAMEMENQKPIQVDLGHLLAFNPFHNFPSLPTSRDELVKECLEEGTKLVQAVADSLFNLPSTEDVDGPLVKLPPPTTKLPREKHLPKPKPPTKWEEFAKKKGIKKRKKDKVVWDEQTGTWKRRFGYDRVNDDKDVPIIDAKMTDEPGEDPYAKRKDDKKKRVEKQEKNRLQNLKQAAKVGALPSHVQLAATALPITGTQAPQKKVTKDELGNVAGMAATSTASGGKFDRKLPGEKPAKKQGKHRKFLPVVEGSGIGSREKEQNDNVLNKLISKHSHEILNVGKAVTMYNVKKEKKYRNKKNQEGKSSSSSSSKLKPKKQINKKSAKKGSGSAKKGSGSAKKGKAK